ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 45572.00 81.73 130.01 95.2 MIR181C-201 miRNA diencephalon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 5253.00 9.42 14.99 100.0 MIR181C-201 miRNA diencephalon (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 432.00 91.14 1.23 100.0 MIR194-1-201 miRNA diencephalon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 204195.00 87.66 582.55 89.46 MIR128-2-201 miRNA diencephalon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 34909.00 86.04 99.59 95.55 MIR99A-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2022.00 10.21 5.77 74.04 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 85.00 0.43 0.24 100.0 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 15710.00 79.31 44.82 93.91 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 124.00 66.67 0.35 100.0 MIR183-201 miRNA diencephalon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1233.00 73.61 3.52 100.0 MIR145-201 miRNA diencephalon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 176.00 10.51 0.50 100.0 MIR145-201 miRNA diencephalon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 24030.00 95.78 68.56 96.91 MIR186-201 miRNA diencephalon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 55.00 93.22 0.16 100.0 MIR200B-201 miRNA diencephalon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 1425.00 66.28 4.07 100.0 MIR218-1-201 miRNA diencephalon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 48411.00 88.30 138.11 93.37 MIR181B2-201 miRNA diencephalon (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 333.00 57.81 0.95 100.0 MIR495-201 miRNA diencephalon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 14505.00 90.93 41.38 91.72 MIR10B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 1851.02 25.14 5.28 52.6 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2229.47 30.28 6.36 56.79 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 3028.00 41.12 8.64 100.0 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 180.00 5.13 0.51 100.0 MIR199A1-201 miRNA diencephalon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 7350.00 83.81 20.97 100.0 MIR487B-201 miRNA diencephalon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 7716.12 64.91 22.01 69.63 MIR93-201 miRNA diencephalon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 3288.98 27.67 9.38 39.53 MIR93-201 miRNA diencephalon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 1840.00 87.29 5.25 96.79 MIR532-201 miRNA diencephalon (Tissue)