ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 10963.00 44.44 20.10 100.0 SNORD115-32-201 snoRNA spinal cord (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 14785.00 36.10 27.11 100.0 SNORD115-30-201 snoRNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 1783.00 1.81 3.27 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 21968.00 22.32 40.28 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 7360.00 7.48 13.50 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 19483.04 19.80 35.73 67.14 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 5144.87 5.23 9.43 29.26 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 13237.00 21.24 24.27 100.0 SNORD115-42-201 snoRNA spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 587.00 2.11 1.08 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2702.43 9.73 4.96 47.03 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 146.36 0.53 0.27 27.1 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 60.00 0.22 0.11 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 361.76 1.30 0.66 63.25 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 301.00 1.08 0.55 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 25.00 0.09 0.05 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 8.00 0.03 0.01 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1356.00 4.88 2.49 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 22387.00 50.97 41.05 100.0 SNORD114-9-201 snoRNA spinal cord (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 14934.00 34.00 27.38 100.0 SNORD114-9-201 snoRNA spinal cord (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1205.00 2.56 2.21 100.0 Y_RNA.234-201 misc RNA spinal cord (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 6.00 0.02 0.01 100.0 RNA5S9-201 rRNA spinal cord (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 3908.00 38.75 7.17 100.0 SNORD115-23-201 snoRNA spinal cord (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 66.00 1.42 0.12 100.0 RNA5SP141-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 1150.00 41.32 2.11 100.0 SNORD114-15-201 snoRNA spinal cord (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 972.00 39.35 1.78 100.0 ENST00000364722 snoRNA spinal cord (Tissue)