ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 19187.68 8.64 35.18 13.71 MIR182-201 miRNA spinal cord (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 58892.00 79.78 107.99 82.92 MIR100-201 miRNA spinal cord (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 609.00 83.77 1.12 100.0 MIR301A-201 miRNA spinal cord (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 5658.00 15.06 10.37 28.75 MIR130A-201 miRNA spinal cord (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 31517.00 83.88 57.79 92.28 MIR130A-201 miRNA spinal cord (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 767574.00 98.26 1407.47 99.31 MIRLET7F2-201 miRNA spinal cord (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 1403.00 69.66 2.57 100.0 MIR652-201 miRNA spinal cord (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 78.00 72.22 0.14 100.0 MIR653-201 miRNA spinal cord (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3940.00 62.30 7.22 100.0 MIR140-201 miRNA spinal cord (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 3373.00 38.90 6.18 76.21 MIR106B-201 miRNA spinal cord (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1080.00 12.46 1.98 100.0 MIR106B-201 miRNA spinal cord (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 66298.00 68.75 121.57 98.51 SNORD83A-201 snoRNA spinal cord (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 23892.00 24.77 43.81 95.55 SNORD83A-201 snoRNA spinal cord (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1131.00 72.64 2.07 100.0 SNORD41-201 snoRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 94.00 1.30 0.17 66.2 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 22.00 0.30 0.04 100.0 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 701.00 9.67 1.29 60.96 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1941.00 12.83 3.56 100.0 MT-TV-201 Mt tRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 6596.00 7.90 12.09 87.99 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 8292.00 9.93 15.20 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 276.00 0.33 0.51 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 133.00 0.16 0.24 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 7129.00 8.53 13.07 86.27 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 213.00 0.25 0.39 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 28.00 0.03 0.05 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)