ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 4122.00 78.25 13.36 97.42 MIR30D-201 miRNA occipital lobe (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 3425.00 12.37 11.10 93.4 MIR126-201 miRNA occipital lobe (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 23549.00 85.05 76.32 100.0 MIR126-201 miRNA occipital lobe (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 686.00 27.87 2.22 100.0 MIR374A-201 miRNA occipital lobe (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 19.00 52.78 0.06 100.0 MIR31-201 miRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 5.00 0.09 0.02 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 47.00 0.88 0.15 90.38 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 21.00 0.39 0.07 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1.00 0.02 0.00 20.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 5.00 0.09 0.02 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 18.47 0.35 0.06 59.57 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 120.00 2.25 0.39 98.36 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 12.00 0.22 0.04 75.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 10.00 0.19 0.03 62.5 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 6.00 0.11 0.02 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 13.90 0.26 0.05 46.32 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 18.95 0.36 0.06 57.41 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 5.00 0.09 0.02 71.43 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 12.00 0.22 0.04 75.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 26.99 0.51 0.09 51.9 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 7.00 0.13 0.02 70.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 11.00 0.21 0.04 91.67 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 736.00 13.79 2.39 99.73 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 11.00 0.21 0.04 84.62 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 5197.00 65.71 16.84 100.0 Y_RNA.14-201 misc RNA occipital lobe (Tissue)