ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 683.00 0.60 2.21 100.0 SNORD69-201 snoRNA occipital lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 466.00 0.41 1.51 100.0 SNORD69-201 snoRNA occipital lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1048.00 0.92 3.40 100.0 SNORD69-201 snoRNA occipital lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 109230.00 96.00 353.99 100.0 SNORD69-201 snoRNA occipital lobe (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1165.00 58.45 3.78 68.73 SNORD70-201 snoRNA occipital lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 119.00 6.50 0.39 100.0 B4GALNT2-202 protein coding occipital lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 1251.00 68.36 4.05 79.63 B4GALNT2-202 protein coding occipital lobe (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 2475.00 89.80 8.02 100.0 NDE1-202 protein coding occipital lobe (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 12.00 85.71 0.04 100.0 MIR208B-201 miRNA occipital lobe (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 96.00 70.59 0.31 100.0 MIR450B-201 miRNA occipital lobe (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 289.00 54.02 0.94 100.0 MIR887-201 miRNA occipital lobe (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 1244.00 91.74 4.03 100.0 MIR889-201 miRNA occipital lobe (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 3686.00 85.15 11.95 100.0 SNORD111-201 snoRNA occipital lobe (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1630.00 59.49 5.28 76.53 SNORD88A-201 snoRNA occipital lobe (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 354.00 95.16 1.15 100.0 MIR548K-201 miRNA occipital lobe (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 164.00 53.77 0.53 100.0 MIR320B2-201 miRNA occipital lobe (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 3641.00 93.70 11.80 100.0 MIR1271-201 miRNA occipital lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 112.00 0.12 0.36 100.0 SNORD100-201 snoRNA occipital lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 89965.00 96.97 291.56 100.0 SNORD100-201 snoRNA occipital lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 860.00 0.93 2.79 100.0 SNORD100-201 snoRNA occipital lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 198.00 0.21 0.64 100.0 SNORD100-201 snoRNA occipital lobe (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1088.00 67.70 3.53 100.0 SNORD111B-201 snoRNA occipital lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 1001.00 53.99 3.24 100.0 RNU2-36P-201 snRNA occipital lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 15.00 0.81 0.05 100.0 RNU2-36P-201 snRNA occipital lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 51866.00 96.78 168.09 98.97 SNORD19C-201 snoRNA occipital lobe (Tissue)