ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 734.00 39.72 1.99 100.0 SNORD14C-201 snoRNA tongue (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 675.00 50.26 1.83 100.0 SNORD115-44-201 snoRNA tongue (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 17.00 2.69 0.05 100.0 RNA5SP77-201 rRNA pseudogene tongue (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 422160.00 67.40 1145.21 98.64 SNORD114-22-201 snoRNA tongue (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 165221.00 26.38 448.20 100.0 SNORD114-22-201 snoRNA tongue (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 10684.00 80.68 28.98 100.0 SNORD6-201 snoRNA tongue (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1064.00 8.04 2.89 100.0 SNORD6-201 snoRNA tongue (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 923.00 7.94 2.50 100.0 RNY3-201 misc RNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 3409.00 5.35 9.25 88.57 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4785.37 7.51 12.98 43.71 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6199.88 9.73 16.82 56.64 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 381.00 0.60 1.03 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 386.00 0.61 1.05 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 40970.00 64.32 111.14 99.1 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 285.00 0.45 0.77 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 12101.00 91.61 32.83 94.22 MIR146B-201 miRNA tongue (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 253.00 29.52 0.69 100.0 SNHG20-201 lncRNA tongue (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 318.00 20.03 0.86 100.0 ATP5MK-205 protein coding tongue (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 413.00 26.01 1.12 100.0 ATP5MK-205 protein coding tongue (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 15.00 8.88 0.04 100.0 LINC01556-201 lncRNA tongue (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 323.00 53.65 0.88 100.0 ATAD3A-202 protein coding tongue (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8640.00 60.66 23.44 78.81 TMC5-202 protein coding tongue (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 18.00 27.27 0.05 100.0 ZMYM2-203 protein coding tongue (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1078.00 10.41 2.92 100.0 RNVU1-7-201 snRNA tongue (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 942.00 43.69 2.56 100.0 SNORD24-201 snoRNA tongue (Tissue)