ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 75.00 0.00 0.20 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 46212.00 66.85 125.36 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 7902.00 11.43 21.44 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 7622.00 22.94 20.68 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 37.00 0.16 0.10 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 5.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 3285.00 0.10 8.91 10.13 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1657.00 29.85 4.50 81.59 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 942.00 16.97 2.56 36.24 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 100.00 2.28 0.27 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 517053.00 67.52 1402.63 89.66 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2519.00 0.33 6.83 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 3672.00 41.15 9.96 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 72.00 0.46 0.20 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 10.00 0.16 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 522.00 0.67 1.42 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 83.00 0.11 0.23 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 117.00 0.15 0.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 355.00 0.46 0.96 99.16 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 71.00 0.09 0.19 37.17 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 226.00 0.29 0.61 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 6953.00 29.73 18.86 41.55 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 222.00 0.95 0.60 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 153.00 0.65 0.42 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 152.00 0.04 0.41 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)