ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 207.00 33.82 0.56 100.0 ENST00000837997 lncRNA tongue (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4822.00 70.76 13.08 79.15 ENST00000839036 lncRNA tongue (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 32.00 21.05 0.09 100.0 ENST00000849527 lncRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 89560.00 54.04 242.95 75.82 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 10.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1451.00 0.05 3.94 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 7261.00 49.09 19.70 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1890.00 12.78 5.13 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 48.00 1.07 0.13 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 3.00 0.20 0.01 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 2883.00 45.81 7.82 67.6 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 290.00 0.01 0.79 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 47.00 23.50 0.13 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 23786.00 37.07 64.53 91.8 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 9.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 35.00 0.05 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 4132.00 18.69 11.21 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 622.00 0.08 1.69 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1003.00 0.13 2.72 83.44 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 380.00 0.05 1.03 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 229.00 0.03 0.62 73.63 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 121706.00 15.89 330.16 45.14 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 98.00 0.01 0.27 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 10.00 0.00 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1840.00 69.33 4.99 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA tongue (Tissue)