ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 390.00 33.33 1.06 100.0 SNORD115-34-201 snoRNA tongue (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 988.00 41.64 2.68 100.0 RNU5E-1-201 snRNA tongue (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 24.00 0.74 0.07 72.73 RNA5SP370-201 rRNA pseudogene tongue (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 369.00 21.09 1.00 100.0 SNORA31-201 snoRNA tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 15.00 0.46 0.04 100.0 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 167.00 5.16 0.45 69.01 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 86.00 2.66 0.23 78.18 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 19.00 0.59 0.05 100.0 RNA5SP389-201 rRNA pseudogene tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 1344.00 1.89 3.65 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 6885.00 9.68 18.68 77.24 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 7687.67 10.81 20.85 36.02 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4461.00 6.27 12.10 78.68 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2206.00 3.10 5.98 56.32 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 425.00 0.60 1.15 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1213.00 1.71 3.29 46.02 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2888.00 4.06 7.83 40.08 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1041.59 1.46 2.83 51.77 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2350.00 3.31 6.37 54.66 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 4028.00 5.67 10.93 77.78 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 949.00 1.33 2.57 100.0 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 14571.23 20.49 39.53 71.42 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 917.37 1.29 2.49 32.94 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2086.00 2.93 5.66 83.88 RNU5A-1-201 snRNA tongue (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 74963.00 79.98 203.36 100.0 SNORD114-14-201 snoRNA tongue (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 920.00 5.19 2.50 100.0 SNORD104-201 snoRNA tongue (Tissue)