ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 269.00 72.90 0.73 100.0 MIR301A-201 miRNA tongue (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 3246.00 19.87 8.81 35.99 MIR130A-201 miRNA tongue (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 12797.00 78.33 34.72 86.87 MIR130A-201 miRNA tongue (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 471832.00 97.57 1279.96 99.23 MIRLET7F2-201 miRNA tongue (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 646.00 67.50 1.75 100.0 MIR652-201 miRNA tongue (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 519.00 52.27 1.41 100.0 MIR653-201 miRNA tongue (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 4145.00 73.95 11.24 100.0 MIR140-201 miRNA tongue (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 261.00 11.89 0.71 100.0 MIR106B-201 miRNA tongue (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 709.00 32.30 1.92 75.43 MIR106B-201 miRNA tongue (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 33165.00 30.71 89.97 96.12 SNORD83A-201 snoRNA tongue (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 69773.00 64.60 189.28 98.08 SNORD83A-201 snoRNA tongue (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 2533.00 80.36 6.87 100.0 SNORD41-201 snoRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 459.00 5.03 1.25 48.99 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 42.00 0.46 0.11 100.0 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 69.00 0.76 0.19 60.0 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1491.00 18.76 4.04 100.0 MT-TV-201 Mt tRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 1830.00 3.00 4.96 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 3705.00 6.07 10.05 82.06 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 4382.00 7.18 11.89 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 799.00 1.31 2.17 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3883.00 6.37 10.53 89.18 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 272.00 0.45 0.74 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 19.00 0.03 0.05 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 17266.00 31.88 46.84 84.91 MT-TI-201 Mt tRNA tongue (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 12526.00 23.13 33.98 100.0 MT-TI-201 Mt tRNA tongue (Tissue)