ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 4947.00 7.25 16.81 100.0 ZFAS1-242 lncRNA spinal cord (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 116.00 38.28 0.39 100.0 ENST00000837997 lncRNA spinal cord (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 60.00 19.80 0.20 100.0 ENST00000837997 lncRNA spinal cord (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 7361.00 71.24 25.01 79.81 ENST00000839036 lncRNA spinal cord (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 20.00 10.75 0.07 100.0 ENST00000849527 lncRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 15823.00 44.56 53.75 51.05 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 7.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1752.00 0.26 5.95 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2741.00 59.30 9.31 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 430.00 9.30 1.46 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 95.00 7.50 0.32 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 31.00 3.42 0.11 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 2361.00 53.87 8.02 79.93 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 194.00 0.03 0.66 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 285.00 35.54 0.97 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 47.00 1.13 0.16 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 529.00 12.76 1.80 96.01 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 6.00 0.14 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1272.00 31.25 4.32 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2262.00 0.70 7.68 89.83 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 89.00 0.03 0.30 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 307.00 0.09 1.04 81.87 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 47249.00 14.57 160.52 46.08 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 674.00 0.21 2.29 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 15.00 0.00 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)