ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 91421.00 54.57 310.58 93.72 SNHG12-223 lncRNA spinal cord (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 74146.00 44.25 251.89 98.6 SNHG12-223 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 3156.00 0.18 10.72 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1299073.00 73.16 4413.24 74.63 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1537.00 0.09 5.22 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 421.68 0.02 1.43 56.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 844.56 0.05 2.87 43.99 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 556.49 0.03 1.89 22.27 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2153.00 0.12 7.31 65.36 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 409.00 0.02 1.39 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 563.00 63.98 1.91 100.0 ENST00000778783 lncRNA spinal cord (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 5589.00 87.27 18.99 90.6 MIR155HG-205 lncRNA spinal cord (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 18.00 64.29 0.06 100.0 ENST00000784740 lncRNA spinal cord (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 108.00 2.35 0.37 100.0 ENST00000785178 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 61.00 5.17 0.21 78.21 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 385.00 32.65 1.31 100.0 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 17.00 1.44 0.06 29.82 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 1570.00 52.23 5.33 69.19 ENST00000788343 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 8262.58 33.53 28.07 56.55 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4705.87 19.09 15.99 32.21 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 423.00 1.72 1.44 39.68 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 408539.00 78.15 1387.90 90.36 MIR181A1HG-212 lncRNA spinal cord (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 3748.00 0.72 12.73 100.0 MIR181A1HG-212 lncRNA spinal cord (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 74.00 9.95 0.25 100.0 C19orf48P-218 lncRNA spinal cord (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 235.00 31.59 0.80 100.0 C19orf48P-218 lncRNA spinal cord (Tissue)