ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 715.00 0.05 2.43 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 2823.00 0.21 9.59 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 203.00 0.01 0.69 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 424.00 0.03 1.44 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 8465.00 0.62 28.76 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 129.00 0.01 0.44 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1585.00 0.12 5.38 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 38204.00 2.82 129.79 68.41 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1153.00 0.09 3.92 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 169398.00 12.49 575.48 97.79 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1972.00 0.15 6.70 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1040.00 0.08 3.53 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 1.00 0.00 0.00 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 79634.00 5.87 270.53 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3920.00 0.29 13.32 77.99 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 573.04 0.04 1.95 54.42 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 58.00 0.00 0.20 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 4097.00 0.30 13.92 64.65 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 922.00 0.07 3.13 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 3312.00 0.24 11.25 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 525.00 0.04 1.78 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 131827.00 37.96 447.85 100.0 SNHG14-315 lncRNA spinal cord (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 83292.00 23.99 282.96 89.72 SNHG14-315 lncRNA spinal cord (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 81140.00 23.37 275.65 84.17 SNHG14-315 lncRNA spinal cord (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1473.00 0.82 5.00 100.0 SNHG5-273 lncRNA spinal cord (Tissue)