ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 5795.66 3.77 9.62 25.84 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 25556.05 16.62 42.42 73.67 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 46020.00 29.92 76.39 100.0 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 943.00 0.61 1.57 100.0 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1265.00 0.82 2.10 100.0 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 28204.00 16.91 46.81 100.0 SNORD115-42-201 snoRNA temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 4.00 0.03 0.01 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 318.00 2.03 0.53 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1.00 0.01 0.00 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 20.00 0.13 0.03 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 14.40 0.09 0.02 23.99 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 108.00 0.69 0.18 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 459.00 2.93 0.76 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2075.38 13.24 3.44 46.84 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 41.25 0.26 0.07 65.47 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 10946.00 44.06 18.17 100.0 SNORD114-9-201 snoRNA temporal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 10045.00 40.43 16.67 100.0 SNORD114-9-201 snoRNA temporal lobe (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 811.00 2.28 1.35 100.0 Y_RNA.234-201 misc RNA temporal lobe (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 10031.00 43.16 16.65 100.0 SNORD115-23-201 snoRNA temporal lobe (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 12.00 0.23 0.02 100.0 RNA5SP141-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 484.00 42.01 0.80 100.0 SNORD114-15-201 snoRNA temporal lobe (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1418.00 37.66 2.35 100.0 ENST00000364722 snoRNA temporal lobe (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 37302.00 20.98 61.92 100.0 SNORD115-15-201 snoRNA temporal lobe (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 255.00 12.88 0.42 100.0 SNORD113-3-201 snoRNA temporal lobe (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 21372.00 57.66 35.47 100.0 SNORD52-201 snoRNA temporal lobe (Tissue)