ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 201.00 31.75 0.33 100.0 ENST00000837997 lncRNA temporal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 202.00 31.91 0.34 100.0 ENST00000837997 lncRNA temporal lobe (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 18923.00 70.25 31.41 80.71 ENST00000839036 lncRNA temporal lobe (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 38.00 10.76 0.06 100.0 ENST00000849527 lncRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 4785.00 11.67 7.94 13.18 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 5.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 3535.00 0.27 5.87 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2877.00 55.45 4.78 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 731.00 14.09 1.21 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 118.00 19.28 0.20 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 169.00 10.25 0.28 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1345.00 47.04 2.23 86.05 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 250.00 0.02 0.41 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3880.00 46.96 6.44 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 950.00 14.26 1.58 97.34 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 1.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 61.00 0.92 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1702.00 34.11 2.83 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 2742.00 1.32 4.55 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1676.00 0.81 2.78 80.85 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 74.00 0.04 0.12 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 379.00 0.18 0.63 90.45 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 16793.00 8.11 27.87 38.17 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 121.00 0.06 0.20 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 43.00 0.02 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)