ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 377.00 0.01 0.63 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 575.00 0.02 0.95 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 9489.00 0.30 15.75 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 312.00 0.01 0.52 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 5634.00 0.18 9.35 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 52554.00 1.67 87.23 69.96 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 3979.00 0.13 6.60 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 317102.00 10.09 526.34 97.03 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 7313.00 0.23 12.14 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 3716.00 0.12 6.17 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 7.00 0.00 0.01 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 124968.00 3.98 207.43 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 10139.00 0.32 16.83 79.97 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 807.36 0.03 1.34 55.37 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 57.00 0.00 0.09 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 12424.00 0.40 20.62 69.64 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 2326.00 0.07 3.86 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 11656.00 0.37 19.35 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1094.00 0.03 1.82 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 326718.00 46.06 542.31 100.0 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 120212.00 16.95 199.54 86.74 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 149795.00 21.12 248.64 82.76 SNHG14-315 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 4310.00 1.57 7.15 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 65280.39 23.77 108.36 32.66 SNHG5-273 lncRNA temporal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 195.00 0.07 0.32 100.0 SNHG5-273 lncRNA temporal lobe (Tissue)