ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1185.00 12.86 1.97 29.73 HSPA9-211 retained intron temporal lobe (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 5610.00 90.37 9.31 100.0 DNM3OS-205 lncRNA temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 227299.00 11.86 377.28 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 182.00 0.01 0.30 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3556.00 0.19 5.90 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 842.00 0.04 1.40 60.71 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 12423.00 0.65 20.62 96.7 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 57.00 0.00 0.09 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 609.00 0.03 1.01 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 642.00 0.03 1.07 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1451738.00 75.73 2409.68 99.79 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 3637.00 0.19 6.04 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 2052.00 0.11 3.41 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1716.00 0.09 2.85 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 3616.00 0.19 6.00 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2428.00 0.13 4.03 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1061.00 0.06 1.76 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 331.00 0.02 0.55 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1101.00 0.06 1.83 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 11590.00 0.60 19.24 84.94 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 9999.00 0.52 16.60 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 30109.00 1.57 49.98 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 68534.00 3.58 113.76 97.51 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 531.00 0.03 0.88 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4711.00 0.25 7.82 100.0 GAS5-230 retained intron temporal lobe (Tissue)