ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 22.00 0.00 0.04 100.0 C19orf48P-203 retained intron temporal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 127.00 2.70 0.21 100.0 RPS11-206 retained intron temporal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 4034.00 85.76 6.70 100.0 RPS11-206 retained intron temporal lobe (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 26284.00 65.07 43.63 66.79 CARMN-209 lncRNA temporal lobe (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 5585.00 30.93 9.27 100.0 ENST00000602478 lncRNA temporal lobe (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 1.00 16.67 0.00 100.0 PPFIA1P1-201 processed pseudogene temporal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1533.00 35.95 2.54 100.0 SNORD114-21-201 snoRNA temporal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1084.00 25.42 1.80 100.0 SNORD114-21-201 snoRNA temporal lobe (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 34534.00 20.05 57.32 100.0 SNORD115-40-201 snoRNA temporal lobe (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 56864.00 98.17 94.39 100.0 MIR98-201 miRNA temporal lobe (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 28918.00 96.57 48.00 100.0 SNORD113-5-201 snoRNA temporal lobe (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 15431.00 88.92 25.61 100.0 MIR15A-201 miRNA temporal lobe (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 597.00 80.57 0.99 100.0 MIR376C-201 miRNA temporal lobe (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1009.00 52.94 1.67 100.0 SNHG21-206 retained intron temporal lobe (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 41.00 3.84 0.07 100.0 SNORD11B-201 snoRNA temporal lobe (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2989.00 66.22 4.96 100.0 SNORD91B-201 snoRNA temporal lobe (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 175.00 68.63 0.29 100.0 MIR219A2HG-201 lncRNA temporal lobe (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 18857.00 64.25 31.30 81.21 SNORD91A-201 snoRNA temporal lobe (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 6819.00 46.52 11.32 96.82 MIR486-1-201 miRNA temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 7250.00 6.08 12.03 65.36 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 2639.00 2.21 4.38 100.0 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1229.00 1.03 2.04 100.0 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 78556.00 65.87 130.39 83.81 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 990.00 11.71 1.64 46.18 RNA5-8SN2-201 rRNA temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 13.95 0.17 0.02 60.67 RNA5-8SN2-201 rRNA temporal lobe (Tissue)