ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 126756.00 54.18 210.40 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 91755.00 39.22 152.30 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2979.00 99.37 4.94 100.0 TEKT4P2-201 transcribed unprocessed pseudogene temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 160520.00 88.98 266.44 98.57 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 54.00 0.03 0.09 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 2286.00 1.27 3.79 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 689.00 0.38 1.14 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 308.00 0.17 0.51 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 8.00 0.04 0.01 100.0 ENST00000563103 lncRNA temporal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 216.00 1.53 0.36 100.0 RPL4-207 retained intron temporal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8572.00 60.81 14.23 100.0 RPL4-207 retained intron temporal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1198.00 19.06 1.99 82.68 ENST00000565336 lncRNA temporal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 3494.00 55.60 5.80 90.35 ENST00000565336 lncRNA temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3605.00 0.66 5.98 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 980.00 0.18 1.63 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 5374.00 0.99 8.92 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 463918.00 85.09 770.04 90.99 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 9137.00 62.07 15.17 100.0 RPL4-214 retained intron temporal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 310.00 2.11 0.51 100.0 RPL4-214 retained intron temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 625.00 2.31 1.04 100.0 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 8854.60 32.76 14.70 53.78 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 8552.48 31.64 14.20 49.97 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4977.00 65.68 8.26 100.0 ENST00000570843 lncRNA temporal lobe (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 15800.00 75.49 26.23 100.0 MIR497HG-207 lncRNA temporal lobe (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 231173.00 99.45 383.71 99.72 MIR22HG-212 lncRNA temporal lobe (Tissue)