ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 3736.00 1.00 6.20 100.0 SNORD12B-201 snoRNA temporal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 112.00 0.03 0.19 100.0 SNORD12B-201 snoRNA temporal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 348848.00 93.83 579.04 98.88 SNORD12B-201 snoRNA temporal lobe (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 5843.00 16.72 9.70 100.0 Y_RNA.609-201 misc RNA temporal lobe (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 1434.00 18.59 2.38 100.0 Y_RNA.612-201 misc RNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 128324.00 93.54 213.00 98.9 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 2349.00 1.71 3.90 100.0 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 1238.00 0.90 2.05 100.0 SNORD71-201 snoRNA temporal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 7035.00 72.39 11.68 91.58 MIR194-2HG-201 lncRNA temporal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1635.00 16.82 2.71 60.29 MIR194-2HG-201 lncRNA temporal lobe (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 5.00 0.08 0.01 100.0 LINC01783-201 lncRNA temporal lobe (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 82.00 88.17 0.14 100.0 RPS7P15-201 processed pseudogene temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 158.00 0.61 0.26 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 352.00 1.35 0.58 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 2274.00 8.74 3.77 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 8371.00 32.19 13.89 100.0 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 4538.00 17.45 7.53 86.03 SNORD62B-201 snoRNA temporal lobe (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 22.00 73.33 0.04 100.0 MRPL32-203 nonsense mediated decay temporal lobe (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 3322.00 97.53 5.51 100.0 ENST00000436739 lncRNA temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1524.00 6.53 2.53 41.62 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 935.00 4.01 1.55 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 2718.00 11.64 4.51 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 71.00 0.30 0.12 100.0 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 433.00 1.86 0.72 71.45 TMEM107-204 protein coding temporal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1912.00 60.79 3.17 92.14 SNHG16-201 lncRNA temporal lobe (Tissue)