ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 3864.00 1.66 6.41 100.0 MT-TE-201 Mt tRNA temporal lobe (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 184574.00 79.45 306.37 92.5 MT-TE-201 Mt tRNA temporal lobe (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 4.00 57.14 0.01 100.0 MIR196A1-201 miRNA temporal lobe (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 408.00 4.14 0.68 100.0 MT-RNR1-201 Mt rRNA temporal lobe (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 8576.00 81.47 14.23 100.0 MIR454-201 miRNA temporal lobe (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 41.00 26.97 0.07 100.0 MIR501-201 miRNA temporal lobe (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 23832.00 93.27 39.56 100.0 MIR769-201 miRNA temporal lobe (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 40.00 51.95 0.07 100.0 KRTAP19-1-201 protein coding temporal lobe (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2725.00 17.83 4.52 100.0 MIR708-201 miRNA temporal lobe (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 166.00 85.13 0.28 100.0 MIR509-3-201 miRNA temporal lobe (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 244.00 45.95 0.41 100.0 MIR543-201 miRNA temporal lobe (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 299.00 94.03 0.50 100.0 MIR301B-201 miRNA temporal lobe (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 16319.00 65.14 27.09 84.47 RNU1-82P-201 snRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3675.00 19.04 6.10 77.71 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 1147.00 5.94 1.90 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 6701.00 34.73 11.12 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 59.00 0.31 0.10 100.0 SNORD66-201 snoRNA temporal lobe (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 996.00 75.28 1.65 100.0 U3.17-201 snoRNA temporal lobe (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2277.00 44.14 3.78 100.0 SNORD17-201 snoRNA temporal lobe (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 27.00 38.03 0.04 100.0 SNORD72-201 snoRNA temporal lobe (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2173.00 78.70 3.61 100.0 SNORD70B-201 snoRNA temporal lobe (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 9740.00 60.75 16.17 96.06 RNY4P18-201 misc RNA temporal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 131405.00 93.63 218.11 100.0 SNORD90-201 snoRNA temporal lobe (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 641.00 0.46 1.06 9.37 SNORD90-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 3905.00 1.63 6.48 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)