ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 31826.00 81.59 52.83 91.45 MIR130A-201 miRNA temporal lobe (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 1145816.00 98.20 1901.89 99.27 MIRLET7F2-201 miRNA temporal lobe (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 671.00 68.75 1.11 100.0 MIR652-201 miRNA temporal lobe (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 7.00 77.78 0.01 100.0 MIR653-201 miRNA temporal lobe (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1409.00 49.20 2.34 100.0 MIR140-201 miRNA temporal lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1262.00 15.35 2.09 100.0 MIR106B-201 miRNA temporal lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 2080.00 25.30 3.45 68.87 MIR106B-201 miRNA temporal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 70620.00 74.03 117.22 98.77 SNORD83A-201 snoRNA temporal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 18207.00 19.09 30.22 94.47 SNORD83A-201 snoRNA temporal lobe (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 310.00 58.05 0.51 100.0 SNORD41-201 snoRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 5.00 0.23 0.01 100.0 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 7.00 0.33 0.01 50.0 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 185.00 8.59 0.31 57.1 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 697.00 10.61 1.16 100.0 MT-TV-201 Mt tRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 2770.00 6.45 4.60 80.08 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 291.00 0.68 0.48 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 575.00 1.34 0.95 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 184.00 0.43 0.31 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 5972.00 13.91 9.91 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 8.00 0.02 0.01 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 2557.00 5.96 4.24 95.7 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 931.00 25.73 1.55 85.81 MT-TI-201 Mt tRNA temporal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 681.00 18.82 1.13 100.0 MT-TI-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 6661.00 30.40 11.06 85.78 MT-TQ-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1729.13 7.89 2.87 59.22 MT-TQ-201 Mt tRNA temporal lobe (Tissue)