ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 1.00 0.03 0.00 100.0 RNA5SP370-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 236.00 36.88 0.83 100.0 SNORA31-201 snoRNA parietal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 2.00 0.07 0.01 100.0 RNA5SP389-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 17.00 0.59 0.06 85.0 RNA5SP389-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 7.00 0.24 0.02 100.0 RNA5SP389-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 2.00 0.07 0.01 100.0 RNA5SP389-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 802.00 1.92 2.84 78.09 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3491.00 8.37 12.35 72.85 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 4646.17 11.13 16.44 36.57 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1564.00 3.75 5.53 75.23 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 795.00 1.91 2.81 57.53 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 69.00 0.17 0.24 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 126.00 0.30 0.45 20.1 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1934.00 4.63 6.84 42.82 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 453.84 1.09 1.61 56.87 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 891.00 2.14 3.15 57.78 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 2400.00 5.75 8.49 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 8297.83 19.89 29.36 69.19 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 785.00 1.88 2.78 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 309.56 0.74 1.10 29.59 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 693.00 1.66 2.45 92.28 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 2132.00 75.60 7.54 100.0 SNORD114-14-201 snoRNA parietal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 709.00 4.33 2.51 100.0 SNORD104-201 snoRNA parietal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1226.00 7.49 4.34 100.0 SNORD104-201 snoRNA parietal lobe (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 69823.00 60.04 247.01 95.96 SNORD115-9-201 snoRNA parietal lobe (Tissue)