ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 2.28 16.29 0.01 57.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 2.00 14.29 0.01 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 1.00 7.14 0.00 50.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 2.00 14.29 0.01 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 2.00 1.18 0.01 100.0 RPSA-216 retained intron parietal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 2844.00 0.83 10.06 65.04 MIR99AHG-370 lncRNA parietal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 329722.00 96.62 1166.46 98.8 MIR99AHG-370 lncRNA parietal lobe (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 118.00 69.01 0.42 100.0 HPS4-237 retained intron parietal lobe (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 1431.00 90.74 5.06 100.0 MEG8-253 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 174.00 20.16 0.62 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 246.00 28.51 0.87 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 115.00 13.33 0.41 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 444.00 13.12 1.57 100.0 DNAJC5-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 688.00 13.17 2.43 100.0 ENST00000707189 TEC parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 296.00 0.10 1.05 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 148440.51 51.16 525.14 57.95 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 54.00 0.02 0.19 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 657.00 0.23 2.32 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 122880.11 42.35 434.71 46.97 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 7780.00 2.68 27.52 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 134.00 0.05 0.47 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 6024.00 2.08 21.31 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 3863.00 1.33 13.67 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 934.00 0.27 3.30 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 713.00 0.21 2.52 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)