ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 10.00 0.00 0.04 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 99716.00 7.16 352.76 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 5696.00 0.41 20.15 78.23 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 494.93 0.04 1.75 54.15 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 38.00 0.00 0.13 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 6983.00 0.50 24.70 67.67 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1869.00 0.13 6.61 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 1457.00 0.10 5.15 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1436.00 0.10 5.08 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 221289.00 38.55 782.85 100.0 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 120055.00 20.92 424.72 88.75 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 158211.00 27.56 559.70 86.63 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2444.00 1.00 8.65 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 60174.23 24.70 212.88 33.32 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 228.00 0.09 0.81 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 379.00 0.16 1.34 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 139249.17 57.16 492.62 68.84 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 14938.00 6.13 52.85 85.42 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 87.00 0.04 0.31 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2062.00 0.85 7.29 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 39.00 0.02 0.14 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4051.00 1.66 14.33 99.56 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 2393.00 2.82 8.47 76.77 SNHG14-323 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 678.00 0.26 2.40 75.17 MEG8-251 lncRNA parietal lobe (Tissue)