ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 3468.00 42.28 12.27 100.0 SNORD98-201 snoRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 92580.02 38.39 327.52 41.32 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 152.33 0.06 0.54 19.48 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 277.00 0.11 0.98 100.0 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 578.50 0.24 2.05 73.98 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 785.00 17.78 2.78 100.0 MEG8-222 lncRNA parietal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 1963.00 44.47 6.94 100.0 MEG8-222 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 19580.00 6.75 69.27 95.04 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 116955.00 40.35 413.75 89.09 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 25450.00 8.78 90.03 100.0 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 497.00 0.17 1.76 78.27 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 645.00 0.22 2.28 100.0 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 5651.00 1.95 19.99 48.05 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 42684.00 14.72 151.00 73.87 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 31603.00 10.90 111.80 67.15 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1032.28 25.48 3.65 69.56 5S_rRNA.20-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 211.00 3.34 0.75 100.0 HSPA9-211 retained intron parietal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1270.00 20.08 4.49 40.22 HSPA9-211 retained intron parietal lobe (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 2607.00 92.48 9.22 100.0 DNM3OS-205 lncRNA parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 225.00 0.03 0.80 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3007.00 0.35 10.64 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 1208.00 0.14 4.27 78.75 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 5202.00 0.60 18.40 94.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 14.00 0.00 0.05 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 600.00 0.07 2.12 100.0 GAS5-230 retained intron parietal lobe (Tissue)