ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1268.00 43.22 4.49 100.0 SNORD114-21-201 snoRNA parietal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 583.00 19.87 2.06 100.0 SNORD114-21-201 snoRNA parietal lobe (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 65.00 0.17 0.23 100.0 SNORD115-40-201 snoRNA parietal lobe (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 22989.00 98.51 81.33 100.0 MIR98-201 miRNA parietal lobe (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 15451.00 92.39 54.66 100.0 SNORD113-5-201 snoRNA parietal lobe (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 5159.00 90.18 18.25 100.0 MIR15A-201 miRNA parietal lobe (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 326.00 79.51 1.15 100.0 MIR376C-201 miRNA parietal lobe (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 761.00 59.92 2.69 100.0 SNHG21-206 retained intron parietal lobe (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 33.00 6.23 0.12 100.0 SNORD11B-201 snoRNA parietal lobe (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3307.00 72.38 11.70 100.0 SNORD91B-201 snoRNA parietal lobe (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 80.00 69.57 0.28 100.0 MIR219A2HG-201 lncRNA parietal lobe (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 12364.00 55.52 43.74 73.39 SNORD91A-201 snoRNA parietal lobe (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 14670.00 47.48 51.90 97.38 MIR486-1-201 miRNA parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 15890.00 16.86 56.21 70.92 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1466.00 1.56 5.19 100.0 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 513.00 0.54 1.81 100.0 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 50216.00 53.29 177.65 79.64 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 827.00 14.61 2.93 37.71 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 18.06 0.32 0.06 62.27 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 1.00 0.02 0.00 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 313.00 5.53 1.11 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 30.00 0.53 0.11 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1814.00 32.04 6.42 68.69 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 10.31 0.18 0.04 35.54 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 48.00 21.15 0.17 100.0 MIR376A1-201 miRNA parietal lobe (Tissue)