ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1661.00 2.47 5.88 100.0 SNORD71-201 snoRNA parietal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 534.00 0.79 1.89 100.0 SNORD71-201 snoRNA parietal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 60860.00 90.52 215.30 98.45 SNORD71-201 snoRNA parietal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 5278.00 81.20 18.67 94.23 MIR194-2HG-201 lncRNA parietal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 706.00 10.86 2.50 51.09 MIR194-2HG-201 lncRNA parietal lobe (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 2.00 0.03 0.01 100.0 LINC01783-201 lncRNA parietal lobe (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 1.00 20.00 0.00 100.0 RPS7P15-201 processed pseudogene parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 259.00 1.83 0.92 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 4093.00 28.95 14.48 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1557.00 11.01 5.51 82.95 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 2037.00 14.41 7.21 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 53.00 0.37 0.19 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 15.00 78.95 0.05 100.0 MRPL32-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1485.00 97.57 5.25 100.0 ENST00000436739 lncRNA parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1639.00 7.44 5.80 48.52 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1937.00 8.79 6.85 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 1020.00 4.63 3.61 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 71.00 0.32 0.25 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 342.00 1.55 1.21 65.9 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1383.00 55.59 4.89 86.33 SNHG16-201 lncRNA parietal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 677.00 27.21 2.40 100.0 SNHG16-201 lncRNA parietal lobe (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 7735.00 15.80 27.36 100.0 SNHG14-207 lncRNA parietal lobe (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 109497.00 87.92 387.37 97.04 SNORD105B-201 snoRNA parietal lobe (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 5966.00 51.27 21.11 73.22 SNORD121B-201 snoRNA parietal lobe (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 90948.00 91.63 321.75 99.21 SNORD127-201 snoRNA parietal lobe (Tissue)