ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 698.00 18.34 2.47 100.0 MIR106B-201 miRNA parietal lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 811.00 21.31 2.87 62.1 MIR106B-201 miRNA parietal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 15461.00 20.56 54.70 95.2 SNORD83A-201 snoRNA parietal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 54285.00 72.19 192.04 98.72 SNORD83A-201 snoRNA parietal lobe (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 593.00 65.82 2.10 100.0 SNORD41-201 snoRNA parietal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 45.00 2.55 0.16 81.82 MT-TF-201 Mt tRNA parietal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 5.00 0.28 0.02 100.0 MT-TF-201 Mt tRNA parietal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 7.00 0.40 0.02 77.78 MT-TF-201 Mt tRNA parietal lobe (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 486.00 10.78 1.72 100.0 MT-TV-201 Mt tRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 2.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 24.00 0.12 0.08 100.0 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 2539.00 12.75 8.98 100.0 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 634.00 3.18 2.24 81.28 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 702.00 3.53 2.48 93.98 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 42.00 0.21 0.15 100.0 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 27.00 0.14 0.10 100.0 MT-RNR2-201 Mt rRNA parietal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 2321.00 17.89 8.21 83.82 MT-TI-201 Mt tRNA parietal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 3273.00 25.23 11.58 100.0 MT-TI-201 Mt tRNA parietal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 2482.76 31.92 8.78 76.06 MT-TQ-201 Mt tRNA parietal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 27.00 0.35 0.10 100.0 MT-TQ-201 Mt tRNA parietal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 1691.00 21.74 5.98 82.97 MT-TQ-201 Mt tRNA parietal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 618.46 7.95 2.19 58.02 MT-TQ-201 Mt tRNA parietal lobe (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 2146.00 25.75 7.59 100.0 MT-TM-201 Mt tRNA parietal lobe (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 1225.00 14.70 4.33 83.28 MT-TM-201 Mt tRNA parietal lobe (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 69.00 4.81 0.24 100.0 MT-TC-201 Mt tRNA parietal lobe (Tissue)