ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 8542.00 95.23 21.68 100.0 MIR30B-201 miRNA K562 (Cell line)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 197.00 87.56 0.50 100.0 MIR181D-201 miRNA K562 (Cell line)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 5.00 100.00 0.01 100.0 MIR508-201 miRNA K562 (Cell line)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 623.00 90.82 1.58 100.0 MIR215-201 miRNA K562 (Cell line)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 162.00 3.72 0.41 100.0 MIR181A2-201 miRNA K562 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 408012.00 98.72 1035.49 99.68 MIR191-201 miRNA K562 (Cell line)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 3.00 42.86 0.01 75.0 MIR149-201 miRNA K562 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 158.00 21.15 0.40 100.0 MIR181C-201 miRNA K562 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 470.00 62.92 1.19 83.78 MIR181C-201 miRNA K562 (Cell line)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 1107.00 92.33 2.81 100.0 MIR194-1-201 miRNA K562 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 3866.00 81.22 9.81 84.78 MIR128-2-201 miRNA K562 (Cell line)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 53.00 94.64 0.13 98.15 MIR99A-201 miRNA K562 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 10.00 31.25 0.03 83.33 MIR28-201 miRNA K562 (Cell line)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 22396.00 76.47 56.84 100.0 MIR183-201 miRNA K562 (Cell line)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 78.00 29.10 0.20 100.0 MIR145-201 miRNA K562 (Cell line)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 143.00 53.36 0.36 100.0 MIR145-201 miRNA K562 (Cell line)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 139706.00 94.61 354.56 97.12 MIR186-201 miRNA K562 (Cell line)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 6.00 85.71 0.02 100.0 MIR200B-201 miRNA K562 (Cell line)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 920.00 75.53 2.33 100.0 MIR218-1-201 miRNA K562 (Cell line)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 740.00 84.86 1.88 92.27 MIR181B2-201 miRNA K562 (Cell line)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 33.33 0.00 100.0 MIR495-201 miRNA K562 (Cell line)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1429.00 85.42 3.63 88.87 MIR10B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 9534.00 7.76 24.20 100.0 MIR130B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 74470.12 60.64 189.00 74.31 MIR130B-201 miRNA K562 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 31150.19 25.37 79.06 28.79 MIR130B-201 miRNA K562 (Cell line)