ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 104.00 0.08 0.19 61.54 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 389.00 0.31 0.72 63.56 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 12880.00 10.23 23.94 96.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 4047.00 14.03 7.52 74.65 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 132.00 32.20 0.25 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 12.00 2.99 0.02 57.14 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 60.00 60.61 0.11 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 464.00 0.99 0.86 25.45 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1359.00 2.90 2.53 74.55 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 9887.00 21.09 18.38 79.06 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 820.00 7.73 1.52 56.83 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 2826.69 26.63 5.25 85.68 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 602.63 5.68 1.12 18.2 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 4330.00 37.59 8.05 88.77 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 10.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 6265.00 5.40 11.65 54.4 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 2185.00 3.53 4.06 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 6924.00 2.09 12.87 91.14 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 398.00 12.60 0.74 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 6394.00 11.84 11.89 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 32356.00 43.79 60.15 93.66 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 204.00 0.51 0.38 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 4597.00 11.47 8.55 66.88 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 40.00 1.15 0.07 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 990.00 15.88 1.84 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA K562 (Cell line)