ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 2507.00 35.06 4.66 100.0 ENST00000849527 lncRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 2693.00 3.94 5.01 90.86 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 23659.00 34.57 43.98 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1034.00 1.40 1.92 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 11012.00 73.11 20.47 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 24.00 0.16 0.04 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 854.00 14.10 1.59 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 3444.00 7.67 6.40 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 256.00 5.33 0.48 72.32 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 2792.00 3.78 5.19 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 1.16 0.00 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 3581.00 12.41 6.66 88.59 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 373.00 1.29 0.69 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 3099.00 10.74 5.76 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 8559.00 39.64 15.91 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 10522.00 3.18 19.56 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 118214.00 35.73 219.75 90.94 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 2514.00 0.76 4.67 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 31741.00 9.59 59.00 82.71 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 4201.00 1.27 7.81 40.31 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 2972.00 0.90 5.52 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 3101.00 0.94 5.76 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 10.00 2.68 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 125175.00 40.93 232.69 96.49 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA K562 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 50.00 0.85 0.09 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA K562 (Cell line)