ENCFF000KEF

Library Details

Organism: Homo Sapiens
Biosample: melanocyte of skin (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVK
Description: Part of ENCODE experiment ENCSR000CVK. RNA-seq on human skin melanocytes primary whole cells (NHEM.f-M2) from rRNA-depleted Total RNA greater than 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 2328.00 71.45 143.66 100.0 ENST00000747512 lncRNA melanocyte of skin (Primary cell)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 4.00 0.02 0.25 100.0 ENST00000772672 lncRNA melanocyte of skin (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 18654.00 91.21 1151.17 100.0 ENST00000772672 lncRNA melanocyte of skin (Primary cell)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1.00 0.80 0.06 100.0 ENST00000778783 lncRNA melanocyte of skin (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 2.00 0.34 0.12 8.0 ENST00000788343 lncRNA melanocyte of skin (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 4.00 0.08 0.25 100.0 ENST00000823279 lncRNA melanocyte of skin (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 62.00 1.31 3.83 5.29 ENST00000823279 lncRNA melanocyte of skin (Primary cell)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 4.00 44.44 0.25 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA melanocyte of skin (Primary cell)