ENCFF000JOQ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous preadipocyte (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVJ
Description: Part of ENCODE experiment ENCSR000CVJ. The libraries contained in this experiment come from subcutaneous white pre-adipocyte primary whole cells, HWP isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 3305.00 68.65 86.12 100.0 ENST00000722183 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 47334.00 84.11 1233.43 100.0 ENST00000747512 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 0.95 0.32 0.02 95.04 ENST00000756336 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 9.00 0.06 0.23 100.0 ENST00000772672 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 14062.00 92.18 366.43 100.0 ENST00000772672 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 2.00 0.25 0.05 100.0 ENST00000778783 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 7.00 0.65 0.18 9.86 ENST00000788343 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 1.00 0.03 0.03 100.0 ENST00000823279 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 3.00 0.10 0.08 100.0 ENST00000823279 lncRNA subcutaneous preadipocyte (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 30.00 0.96 0.78 4.04 ENST00000823279 lncRNA subcutaneous preadipocyte (Primary cell)