ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 55.00 7.81 0.03 100.0 SNORA31-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 123.00 1.21 0.07 100.0 RNA5SP389-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 112.00 1.10 0.07 36.13 RNA5SP389-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 101.00 0.99 0.06 75.37 RNA5SP389-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 63.00 0.62 0.04 100.0 RNA5SP389-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2148.00 6.40 1.30 74.74 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 92.00 0.27 0.06 100.0 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 597.63 1.78 0.36 53.74 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 5407.00 16.10 3.28 83.11 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 364.00 1.08 0.22 100.0 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 4306.00 12.82 2.61 81.41 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 946.00 2.82 0.57 42.06 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 956.45 2.85 0.58 59.08 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1122.00 3.34 0.68 57.86 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1419.00 4.23 0.86 76.09 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 37.00 0.11 0.02 100.0 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 601.31 1.79 0.36 66.22 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 869.04 2.59 0.53 40.69 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3762.00 11.20 2.28 79.84 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1640.00 4.88 0.99 31.89 RNU5A-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 391.00 60.81 0.24 100.0 SNORD114-14-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 43.00 1.57 0.03 100.0 SNORD104-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 16.00 0.59 0.01 100.0 SNORD104-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 576.00 80.11 0.35 99.65 SNORD115-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 18429.00 61.91 11.18 89.74 RNA5SP358-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)