ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 2.00 100.00 0.00 100.0 MIR369-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 129.00 30.50 0.08 100.0 MIR425-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 134.00 31.68 0.08 100.0 MIR425-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 113.00 53.81 0.07 100.0 MIR210-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 1398.00 96.15 0.85 97.69 MIR378A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 562.00 81.45 0.34 100.0 MIR361-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 187.00 90.34 0.11 94.44 MIR101-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 6.00 66.67 0.00 100.0 MIR323A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 17294.00 97.94 10.49 98.86 MIR26A1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 8.00 61.54 0.00 100.0 MIR129-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 502.00 72.13 0.30 100.0 MIR342-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 19.00 0.24 0.01 100.0 MIR148A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 6989.00 89.91 4.24 90.75 MIR148A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 93.00 98.94 0.06 100.0 MIR410-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 228.00 91.20 0.14 100.0 MIR409-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 3.00 1.20 0.00 100.0 MIR409-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 76.00 84.44 0.05 100.0 MIR411-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 687.00 95.15 0.42 98.28 MIR26B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 349.00 82.12 0.21 92.33 MIR148B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 2.00 8.00 0.00 100.0 MIRLET7G-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 276.00 7.37 0.17 100.0 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 29.00 0.77 0.02 53.7 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 3388.00 90.52 2.06 99.27 MIR30D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 18.00 15.25 0.01 100.0 MIR126-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 90.00 76.27 0.05 100.0 MIR126-201 miRNA neural progenitor cell (In vitro differentiated cells)