ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 101.00 0.32 0.98 100.0 MIR17HG-214 lncRNA body of pancreas (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 17210.07 55.38 166.86 62.2 MIR17HG-214 lncRNA body of pancreas (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 1960.00 6.31 19.00 100.0 MIR17HG-214 lncRNA body of pancreas (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 91.00 0.29 0.88 100.0 MIR17HG-214 lncRNA body of pancreas (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 7.00 0.02 0.07 100.0 MIR17HG-214 lncRNA body of pancreas (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 6225.00 8.98 60.36 100.0 SNHG32-223 lncRNA body of pancreas (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 224.00 0.32 2.17 100.0 SNHG32-223 lncRNA body of pancreas (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 64.00 0.09 0.62 100.0 SNHG32-223 lncRNA body of pancreas (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 937.00 1.35 9.08 76.68 SNHG32-223 lncRNA body of pancreas (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 60505.00 87.25 586.63 100.0 SNHG32-223 lncRNA body of pancreas (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 3598.00 79.41 34.88 99.39 SNHG32-227 lncRNA body of pancreas (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 595.00 13.13 5.77 100.0 SNHG32-227 lncRNA body of pancreas (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 537.00 70.01 5.21 100.0 B4GALT1-203 nonsense mediated decay body of pancreas (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 3868.00 13.35 37.50 100.0 ENST00000722183 lncRNA body of pancreas (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 11853.00 40.92 114.92 91.69 ENST00000722183 lncRNA body of pancreas (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 532.00 1.84 5.16 100.0 ENST00000722183 lncRNA body of pancreas (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 1020.00 76.81 9.89 87.93 THBS3-AS1-228 lncRNA body of pancreas (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 8735.00 84.63 84.69 100.0 MIR200CHG-202 lncRNA body of pancreas (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 84.00 0.81 0.81 100.0 MIR200CHG-202 lncRNA body of pancreas (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 252.00 6.39 2.44 100.0 SNHG16-266 lncRNA body of pancreas (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1809.00 45.84 17.54 100.0 SNHG16-266 lncRNA body of pancreas (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 123.00 3.12 1.19 100.0 SNHG16-266 lncRNA body of pancreas (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 349.00 8.84 3.38 100.0 SNHG16-266 lncRNA body of pancreas (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 77.00 20.16 0.75 100.0 NR2F2-AS1-327 lncRNA body of pancreas (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 800.00 0.36 7.76 43.98 ENST00000747675 lncRNA body of pancreas (Tissue)