ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 758.00 76.72 7.35 93.93 MIR3142HG-201 lncRNA body of pancreas (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 29644.00 83.96 287.42 89.92 MIR151A-201 miRNA body of pancreas (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 1578.00 4.47 15.30 100.0 MIR151A-201 miRNA body of pancreas (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 6700.00 99.54 64.96 100.0 DENND3-221 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 85.00 0.29 0.82 44.74 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 628.00 2.13 6.09 38.91 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 986.00 3.34 9.56 61.09 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 79.00 0.27 0.77 100.0 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 906.00 3.07 8.78 100.0 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 892.00 3.02 8.65 100.0 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 5020.00 17.01 48.67 65.11 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 544.00 1.84 5.27 100.0 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 43.00 12.18 0.42 100.0 HSPA8-211 retained intron body of pancreas (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 128.00 21.26 1.24 100.0 SCARNA9-201 lncRNA body of pancreas (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 2604.00 92.90 25.25 100.0 TAF1D-215 retained intron body of pancreas (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 1244.00 87.18 12.06 100.0 HSPA8-215 retained intron body of pancreas (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 61.00 8.57 0.59 100.0 RPS2-215 retained intron body of pancreas (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 60475.00 76.77 586.34 78.81 ENST00000548801 lncRNA body of pancreas (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 431.00 25.70 4.18 100.0 ENST00000554988 lncRNA body of pancreas (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 590.00 35.18 5.72 100.0 ENST00000554988 lncRNA body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 9210.00 83.58 89.30 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 195.00 1.77 1.89 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 26.00 0.24 0.25 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 140.00 1.27 1.36 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2546.00 97.36 24.69 100.0 TEKT4P2-201 transcribed unprocessed pseudogene body of pancreas (Tissue)