ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 1578.00 91.37 15.30 100.0 SMC1A-204 retained intron body of pancreas (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 7090.00 81.43 68.74 99.11 RABGGTB-208 protein coding CDS not defined body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 517.00 31.72 5.01 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 207.00 12.70 2.01 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 135.00 8.28 1.31 100.0 DDX39B-219 retained intron body of pancreas (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 145.00 35.54 1.41 100.0 RPS8-206 protein coding CDS not defined body of pancreas (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 954.00 4.24 9.25 100.0 RPL13-207 retained intron body of pancreas (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 20446.00 90.84 198.24 99.25 RPL13-207 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 11585.00 7.42 112.32 90.06 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1312.00 0.84 12.72 100.0 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 21547.00 13.81 208.91 77.01 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 7962.00 5.10 77.20 70.08 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 541.00 0.35 5.25 61.83 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 99.00 0.06 0.96 28.05 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 595.00 0.38 5.77 30.61 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 2.00 0.00 0.02 100.0 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 90532.00 58.02 877.76 98.99 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 45.00 0.03 0.44 100.0 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1975.00 1.27 19.15 50.11 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 108.00 0.07 1.05 100.0 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 502.00 0.32 4.87 49.41 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 4002.00 2.56 38.80 91.24 EIF4A2-219 retained intron body of pancreas (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 5737.00 98.66 55.62 100.0 RPS8-207 protein coding CDS not defined body of pancreas (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 55.00 14.44 0.53 100.0 RPL7A-206 protein coding CDS not defined body of pancreas (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 82.00 21.52 0.80 100.0 RPL7A-206 protein coding CDS not defined body of pancreas (Tissue)