ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 268316.00 86.48 2601.49 95.08 MIR194-2HG-201 lncRNA body of pancreas (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 54.00 1.31 0.52 100.0 LINC01783-201 lncRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 317.00 9.40 3.07 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 22.00 0.65 0.21 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 415.00 12.30 4.02 93.68 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 38.00 1.13 0.37 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 797.00 23.62 7.73 100.0 SNORD62B-201 snoRNA body of pancreas (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 6.00 100.00 0.06 100.0 MRPL32-203 nonsense mediated decay body of pancreas (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 347.00 63.79 3.36 100.0 ENST00000436739 lncRNA body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1636.00 21.08 15.86 80.91 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 123.00 1.58 1.19 100.0 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1723.00 22.20 16.71 77.47 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 448.00 5.77 4.34 100.0 TMEM107-204 protein coding body of pancreas (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 202.00 20.22 1.96 100.0 SNHG16-201 lncRNA body of pancreas (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 3074.00 65.28 29.80 92.45 SNORD105B-201 snoRNA body of pancreas (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 48.00 14.95 0.47 53.93 SNORD121B-201 snoRNA body of pancreas (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 12477.00 95.19 120.97 99.23 SNORD127-201 snoRNA body of pancreas (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 145.00 1.11 1.41 100.0 SNORD127-201 snoRNA body of pancreas (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 720.00 100.00 6.98 100.0 SNORD42B-201 snoRNA body of pancreas (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 13.00 0.41 0.13 100.0 RNY4P25-201 misc RNA body of pancreas (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 107.00 94.69 1.04 100.0 SNORD126-201 snoRNA body of pancreas (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 6148.00 87.35 59.61 97.53 SNORD124-201 snoRNA body of pancreas (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 301.00 32.58 2.92 100.0 SNHG12-201 retained intron body of pancreas (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 389.00 18.62 3.77 100.0 RPL3-212 retained intron body of pancreas (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 93.00 4.45 0.90 53.45 RPL3-212 retained intron body of pancreas (Tissue)