ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 209920.68 50.63 2035.31 59.52 MIR182-201 miRNA body of pancreas (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 894.00 81.42 8.67 86.88 MIR100-201 miRNA body of pancreas (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 11.00 100.00 0.11 100.0 MIR301A-201 miRNA body of pancreas (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1265.00 93.01 12.26 97.08 MIR130A-201 miRNA body of pancreas (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 89.00 6.54 0.86 57.42 MIR130A-201 miRNA body of pancreas (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 66956.00 97.23 649.18 98.06 MIRLET7F2-201 miRNA body of pancreas (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 23.00 50.00 0.22 100.0 MIR652-201 miRNA body of pancreas (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 598.00 72.93 5.80 100.0 MIR140-201 miRNA body of pancreas (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 11.00 5.29 0.11 100.0 MIR106B-201 miRNA body of pancreas (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 85.00 40.87 0.82 73.91 MIR106B-201 miRNA body of pancreas (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 12373.00 54.90 119.96 95.38 SNORD83A-201 snoRNA body of pancreas (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 8647.00 38.37 83.84 97.84 SNORD83A-201 snoRNA body of pancreas (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 65.00 84.42 0.63 100.0 SNORD41-201 snoRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 22.00 0.15 0.21 100.0 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 3720.00 25.75 36.07 62.38 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 181.00 1.25 1.75 12.74 MT-TF-201 Mt tRNA body of pancreas (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 236.00 28.75 2.29 100.0 MT-TV-201 Mt tRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 403.00 11.50 3.91 80.28 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 360.00 10.27 3.49 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 13.00 0.37 0.13 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 12.00 0.34 0.12 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 286.00 8.16 2.77 82.66 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 61.00 1.74 0.59 100.0 MT-RNR2-201 Mt rRNA body of pancreas (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 424.00 61.81 4.11 100.0 MT-TI-201 Mt tRNA body of pancreas (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 571.32 3.53 5.54 39.92 MT-TQ-201 Mt tRNA body of pancreas (Tissue)