ENCFF936FXF

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 1382.00 21.54 10.06 84.42 RPL23A-208 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 1.00 0.29 0.01 100.0 MIR133A1HG-202 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 18.00 0.24 0.13 30.51 RPL17-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 11.00 0.15 0.08 5.56 RPL17-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 2.00 0.03 0.01 100.0 RPL17-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 1059.00 14.16 7.71 99.25 RPL17-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 296.00 3.96 2.16 97.37 RPL17-211 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 4.00 13.33 0.03 100.0 ENST00000582320 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 14.00 46.67 0.10 100.0 ENST00000582320 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 1.00 3.33 0.01 100.0 ENST00000582320 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 325.00 6.99 2.37 100.0 RPL17-214 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 425.71 9.16 3.10 48.27 RPL17-214 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 520.87 11.20 3.79 56.19 RPL17-214 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 4307.00 14.03 31.37 100.0 SNORD43-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 18494.00 60.23 134.69 99.92 SNORD43-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 910.00 2.96 6.63 100.0 SNORD43-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 969.00 86.60 7.06 100.0 MIR151B-201 miRNA neuronal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 128017.00 56.69 932.32 100.0 NSRP1-214 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 82913.00 36.71 603.84 95.82 NSRP1-214 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 70.00 5.38 0.51 67.31 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 164.00 12.60 1.19 55.97 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 323.00 24.81 2.35 74.77 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 108.00 8.29 0.79 80.6 MIR23AHG-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 97.00 51.32 0.71 100.0 ODAD3-204 nonsense mediated decay neuronal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 178.00 1.10 1.30 100.0 VMP1-217 retained intron neuronal stem cell (In vitro differentiated cells)