ENCFF936FXF

Library Details

Organism: Homo Sapiens
Biosample: neuronal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR291IZK
Description: Part of ENCODE experiment ENCSR291IZK.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 1813.00 5.33 13.20 100.0 SNORD62B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 1089.00 3.20 7.93 100.0 SNORD62B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 4.00 0.01 0.03 100.0 SNORD62B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 26148.00 76.86 190.43 91.73 SNORD62B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 3762.00 98.10 27.40 100.0 MRPL32-203 nonsense mediated decay neuronal stem cell (In vitro differentiated cells)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1622.00 98.36 11.81 100.0 ENST00000436739 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 3.00 0.31 0.02 50.0 TMEM107-204 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 223.00 23.11 1.62 100.0 TMEM107-204 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 16.00 1.66 0.12 64.0 TMEM107-204 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1.00 0.10 0.01 100.0 TMEM107-204 protein coding neuronal stem cell (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 7.00 1.34 0.05 100.0 SNHG16-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 4.00 0.76 0.03 57.14 SNHG16-201 lncRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 475.00 28.09 3.46 97.34 SNORD105B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 6.00 3.28 0.04 100.0 SNORD121B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 11.00 3.61 0.08 100.0 SNORD127-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 13.00 4.26 0.09 100.0 SNORD127-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 352.00 43.40 2.56 100.0 SNORD42B-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 517.00 20.21 3.77 100.0 RNY4P25-201 misc RNA neuronal stem cell (In vitro differentiated cells)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 1.00 0.70 0.01 100.0 SNORD121A-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 9.00 0.97 0.07 52.94 SNORD126-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 20.00 2.16 0.15 80.0 SNORD126-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 2.00 0.94 0.01 100.0 SNORD124-201 snoRNA neuronal stem cell (In vitro differentiated cells)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 6.00 0.24 0.04 100.0 RPL3-212 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 53807.00 97.75 391.86 100.0 SMC1A-204 retained intron neuronal stem cell (In vitro differentiated cells)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 26.00 0.99 0.19 100.0 RABGGTB-208 protein coding CDS not defined neuronal stem cell (In vitro differentiated cells)