ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 101.00 14.11 0.24 100.0 SNHG10-212 lncRNA omental fat pad (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 17163.18 49.60 40.43 64.08 SNHG19-202 lncRNA omental fat pad (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 16339.74 47.22 38.49 49.12 SNHG19-202 lncRNA omental fat pad (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 0.93 0.00 0.00 93.24 SNHG19-202 lncRNA omental fat pad (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 3532.00 66.58 8.32 100.0 MIR222HG-206 lncRNA omental fat pad (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 762.00 14.36 1.80 79.96 MIR222HG-206 lncRNA omental fat pad (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 238.00 4.49 0.56 100.0 MIR222HG-206 lncRNA omental fat pad (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 469.00 61.47 1.10 100.0 RPSA-216 retained intron omental fat pad (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 481.00 2.87 1.13 69.11 MIR99AHG-370 lncRNA omental fat pad (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 15478.00 92.49 36.46 97.76 MIR99AHG-370 lncRNA omental fat pad (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 106.00 94.64 0.25 100.0 HPS4-237 retained intron omental fat pad (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 151.00 82.51 0.36 100.0 MEG8-253 lncRNA omental fat pad (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 7.00 2.75 0.02 100.0 MEG9-206 lncRNA omental fat pad (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 116.00 45.49 0.27 100.0 MEG9-206 lncRNA omental fat pad (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 2524.00 13.01 5.95 100.0 DNAJC5-203 nonsense mediated decay omental fat pad (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1168.00 24.93 2.75 100.0 ENST00000707189 TEC omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 45590.17 55.17 107.40 65.22 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 8967.00 10.85 21.12 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 25183.61 30.48 59.33 37.39 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 2.00 0.00 0.00 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 13.00 0.02 0.03 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 84.00 0.10 0.20 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 536.00 0.65 1.26 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 29.00 0.04 0.07 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 57.00 0.07 0.13 100.0 MIR17HG-214 lncRNA omental fat pad (Tissue)