ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 69.00 0.08 0.20 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 23.00 0.03 0.07 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 29.00 0.03 0.08 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 53.00 0.06 0.15 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 4056.00 2.22 11.83 100.0 SNHG32-223 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 343.00 0.19 1.00 100.0 SNHG32-223 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 39.00 0.02 0.11 100.0 SNHG32-223 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 1458.00 0.80 4.25 67.28 SNHG32-223 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 174943.00 95.58 510.31 100.0 SNHG32-223 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 31516.00 95.32 91.93 98.91 SNHG32-227 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 239.00 0.72 0.70 100.0 SNHG32-227 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 17.00 0.05 0.05 100.0 SNHG32-227 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 6.00 0.02 0.02 100.0 SNHG32-227 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 173.00 57.28 0.50 100.0 B4GALT1-203 nonsense mediated decay subcutaneous adipose tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1084.00 6.45 3.16 100.0 ENST00000722183 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 691.00 4.11 2.02 71.31 ENST00000722183 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 339.00 2.02 0.99 100.0 ENST00000722183 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 14.00 38.89 0.04 100.0 MIR34BHG-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 5590.00 79.20 16.31 84.33 THBS3-AS1-228 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 3.00 14.29 0.01 100.0 MIR200CHG-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 3.00 14.29 0.01 100.0 MIR200CHG-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 13962.00 84.10 40.73 100.0 SNHG16-266 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 326.00 1.96 0.95 100.0 SNHG16-266 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 281.00 1.69 0.82 100.0 SNHG16-266 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 134.00 0.81 0.39 100.0 SNHG16-266 lncRNA subcutaneous adipose tissue (Tissue)