ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 130.00 0.83 0.38 35.23 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 88.00 0.56 0.26 100.0 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 6726.00 42.72 19.62 100.0 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 12.00 0.08 0.04 100.0 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 143.00 11.13 0.42 100.0 SNHG10-212 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 18449.53 40.57 53.82 43.88 SNHG19-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 23976.19 52.73 69.94 69.94 SNHG19-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 3.73 0.01 0.01 93.24 SNHG19-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 6308.00 55.69 18.40 100.0 MIR222HG-206 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 3377.00 29.82 9.85 85.82 MIR222HG-206 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 65.00 0.57 0.19 100.0 MIR222HG-206 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 1241.00 53.98 3.62 100.0 RPSA-216 retained intron subcutaneous adipose tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 379.00 2.71 1.11 69.16 MIR99AHG-370 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 12926.00 92.37 37.71 97.54 MIR99AHG-370 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 132.00 91.03 0.39 100.0 HPS4-237 retained intron subcutaneous adipose tissue (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 8.00 72.73 0.02 100.0 MEG8-253 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 12.00 3.77 0.04 100.0 MEG9-206 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 115.00 36.16 0.34 100.0 MEG9-206 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 1437.00 12.95 4.19 100.0 DNAJC5-203 nonsense mediated decay subcutaneous adipose tissue (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1041.00 26.51 3.04 100.0 ENST00000707189 TEC subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 731.00 0.88 2.13 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 29305.55 35.11 85.48 38.19 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 1.00 0.00 0.00 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 5.00 0.01 0.01 100.0 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 51176.07 61.31 149.28 64.03 MIR17HG-214 lncRNA subcutaneous adipose tissue (Tissue)