ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 7339.00 28.50 21.41 89.15 SNHG14-315 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 3493.00 0.73 10.19 97.14 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1290.00 0.27 3.76 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 242124.83 50.44 706.28 57.37 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 64.00 0.01 0.19 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 504.00 0.10 1.47 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 203540.08 42.40 593.73 45.54 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 14211.00 2.96 41.45 93.29 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 101.00 0.02 0.29 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 922.00 0.19 2.69 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 418.00 0.09 1.22 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 114.00 8.85 0.33 67.46 SNHG14-323 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 750.00 0.35 2.19 53.8 MEG8-251 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 4275.00 2.01 12.47 91.17 MEG8-251 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 8.00 0.00 0.02 100.0 MEG8-251 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 677.00 0.32 1.97 52.0 MEG8-251 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 201615.00 94.73 588.11 98.65 MEG8-251 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 3716.00 68.31 10.84 91.71 SNHG14-336 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 1487.00 27.33 4.34 50.02 SNHG14-336 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 2494.00 85.56 7.28 97.31 SNHG14-341 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 4317.00 59.99 12.59 100.0 NCL-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 125.00 16.62 0.36 100.0 FMN2-209 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 239.00 1.52 0.70 64.77 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 32.00 0.20 0.09 100.0 LINC02739-203 lncRNA subcutaneous adipose tissue (Tissue)