ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 1158.00 0.06 3.38 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 60.00 0.00 0.18 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 700.00 0.04 2.04 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 440.00 0.02 1.28 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 870.00 0.05 2.54 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 237.00 0.01 0.69 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 15841.00 0.86 46.21 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 171.00 0.01 0.50 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 478.00 0.03 1.39 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 56039.00 3.06 163.47 80.51 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 495390.00 27.05 1445.06 98.2 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 39.00 0.00 0.11 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 345.00 0.02 1.01 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 2.00 0.00 0.01 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 49811.00 2.72 145.30 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3204.00 0.17 9.35 74.65 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1376.53 0.08 4.02 38.79 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 321.00 0.02 0.94 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 5341.00 0.29 15.58 71.19 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 399.00 0.02 1.16 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 947.00 0.05 2.76 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 225.00 0.01 0.66 100.0 SNHG1-248 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 7435.00 28.87 21.69 100.0 SNHG14-315 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 8532.00 33.14 24.89 95.11 SNHG14-315 lncRNA subcutaneous adipose tissue (Tissue)