ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 439.00 16.71 1.28 100.0 MEG8-222 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 490.00 18.65 1.43 100.0 MEG8-222 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 1062.00 8.54 3.10 97.97 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 6153.00 49.48 17.95 96.04 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 1041.00 8.37 3.04 100.0 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 1780.00 14.31 5.19 92.61 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 19.00 0.15 0.06 100.0 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 96.00 0.77 0.28 38.25 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 546.00 4.39 1.59 74.18 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 426.00 3.43 1.24 65.74 SNHG14-224 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2743.60 13.33 8.00 53.59 5S_rRNA.20-201 rRNA pseudogene subcutaneous adipose tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 301.00 2.34 0.88 100.0 HSPA9-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 5929.00 46.03 17.29 61.33 HSPA9-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 4461.00 30.61 13.01 100.0 DNM3OS-205 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 212.00 0.02 0.62 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 1983.00 0.22 5.78 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 264.00 0.03 0.77 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 456.00 0.05 1.33 86.53 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 3585.00 0.40 10.46 73.48 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 12.00 0.00 0.04 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 810.00 0.09 2.36 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 423.00 0.05 1.23 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 494153.00 55.02 1441.45 99.88 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1749.00 0.19 5.10 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 605.00 0.07 1.76 100.0 GAS5-230 retained intron subcutaneous adipose tissue (Tissue)