ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 117.00 1.99 0.34 100.0 SNORD3A-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 5600.00 76.53 16.34 100.0 SNORD92-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 3116.00 40.07 9.09 100.0 NSRP1-214 protein coding subcutaneous adipose tissue (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 3503.00 45.05 10.22 87.18 NSRP1-214 protein coding subcutaneous adipose tissue (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 1237.00 15.22 3.61 100.0 MIR23AHG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 2951.00 36.30 8.61 95.63 MIR23AHG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 460.00 5.66 1.34 90.2 MIR23AHG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 1231.00 15.14 3.59 91.39 MIR23AHG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 615.00 7.56 1.79 76.78 MIR23AHG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 1641.00 68.83 4.79 100.0 ODAD3-204 nonsense mediated decay subcutaneous adipose tissue (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 338.00 2.24 0.99 100.0 VMP1-217 retained intron subcutaneous adipose tissue (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 174.00 1.15 0.51 100.0 VMP1-217 retained intron subcutaneous adipose tissue (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 8589.00 56.83 25.05 64.07 VMP1-217 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 363.00 0.07 1.06 100.0 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 375848.75 68.18 1096.35 73.99 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 141549.69 25.68 412.90 27.09 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 5584.00 1.01 16.29 89.23 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 61.00 0.01 0.18 100.0 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 5.00 0.00 0.01 100.0 C19orf48P-203 retained intron subcutaneous adipose tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 1065.00 32.13 3.11 100.0 RPS11-206 retained intron subcutaneous adipose tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1400.00 42.23 4.08 100.0 RPS11-206 retained intron subcutaneous adipose tissue (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 129373.00 83.49 377.38 84.9 CARMN-209 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 670.00 26.22 1.95 100.0 ENST00000602478 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 131.00 56.71 0.38 100.0 PPFIA1P1-201 processed pseudogene subcutaneous adipose tissue (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1415.00 38.52 4.13 100.0 SNORD114-21-201 snoRNA subcutaneous adipose tissue (Tissue)